Information for 6-CTGCTATTTA (Motif 8)

A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C T G A A C G T G T C A A C T G A G T C C T G A A C T G
p-value:1e-47
log p-value:-1.088e+02
Information Content per bp:1.955
Number of Target Sequences with motif17089.0
Percentage of Target Sequences with motif59.79%
Number of Background Sequences with motif15731.2
Percentage of Background Sequences with motif55.54%
Average Position of motif in Targets100.2 +/- 55.6bp
Average Position of motif in Background100.1 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0032.1_Evx2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGCTATTTA-----
CACCGCTAATTAGCGGT
 A C G T A C G T A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGCTATTTA----
ACTTGCTACCTACACC
 A C G T A C G T A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTGCTATTTA----
--GCTATTTTTGGM
 A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTGCTATTTA-
---CTAATTAA
 A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTGCTATTTA----
--KCTATTTTTRGH
 A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PH0098.1_Lhx8/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTTA-----
CACCGCTAATTAGNNGN
 A C G T A C G T A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGCTATTTA
--NCTAATTA
 A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A
A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGCTATTTA----
--GCTATTTTTAGC
 A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGCTATTTA----
ACATGCTACCTAATAC
 A C G T A C G T A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

LHX2/MA0700.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGCTATTTA--
--ACTAATTAAC
 A G T C A G C T A C T G A G T C A C G T C G T A A G C T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C