Information for 23-CCCRGTAA (Motif 46)

A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G C T C T A G A T C G A C T G
p-value:1e-4
log p-value:-1.029e+01
Information Content per bp:1.858
Number of Target Sequences with motif426.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif346.1
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets121.0 +/- 59.1bp
Average Position of motif in Background119.0 +/- 49.7bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCRGTAA---
SCCTAGCAACAG
 A C G T A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A A C G T A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCRGTAA
TGCCCAGNHW
 A C G T A C G T A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCRGTAA--
CCYMATAAAA
 A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A A C G T A C G T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCRGTAA----
-CAGGTAAGTAT
 A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCRGTAA
TTTCCTGGAAA
 A C G T A C G T A C G T A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCRGTAA
TTTCCCAGAAN
 A C G T A C G T A C G T A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCRGTAA--
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

FOXD1/MA0031.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCCRGTAA----
----GTAAACAT
 A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCRGTAA---
---DGTAAACA
 A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCRGTAA
ATTTCCAAGAA-
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C C T G A A C T G A C G T C G T A G T C A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T