Information for 23-CTGGCACATCAT (Motif 41)

A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
Reverse Opposite:
T G C A C G A T A T C G G T C A C G A T A T C G A C G T C A T G A T G C T G A C C G T A T C A G
p-value:1e-6
log p-value:-1.567e+01
Information Content per bp:1.525
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets107.5 +/- 56.7bp
Average Position of motif in Background89.6 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB3/MA0638.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGGCACATCAT--
GTGCCACGTCATCA
 A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T A C G T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTGGCACATCAT--
ATGCCACGTCATCA
 A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T A C G T A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCACATCAT
VGCTGGCA------
 A C G T A C G T A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGGCACATCAT-
AATGCCACGTCATC
 A C G T A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCACATCAT
CTTGGCAA-----
 A C G T A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCACATCAT
TGTCTGDCACCT---
 A C G T A C G T A C G T A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTGGCACATCAT
CTGTCTGTCACCT---
 A C G T A C G T A C G T A C G T A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGGCACATCAT
-TGACACCT---
 A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCACATCAT
NTTGGCANN----
 A C G T A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGCACATCAT
-TGTCANYT---
 A G T C G C A T A C T G T A C G G T A C T G C A T A G C G C T A C A G T T A G C G C T A A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T