Information for 2-WCTGWCAG (Motif 4)

C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G
Reverse Opposite:
G A T C G C A T C T A G C G T A A G T C C G T A C A T G G C A T
p-value:1e-73
log p-value:-1.684e+02
Information Content per bp:1.678
Number of Target Sequences with motif9728.0
Percentage of Target Sequences with motif34.04%
Number of Background Sequences with motif8238.3
Percentage of Background Sequences with motif29.09%
Average Position of motif in Targets98.8 +/- 55.7bp
Average Position of motif in Background98.5 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:WCTGWCAG-
-YTGWCADY
 C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G A C G T
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-WCTGWCAG-
VGCTGWCAVB
 A C G T C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:forward strand
Alignment:WCTGWCAG--
--TGTCANYT
 C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:WCTGWCAG
-NTGTCAN
 C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:WCTGWCAG
GCTGTCAA
 C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:WCTGWCAG
CCTGTCAA
 C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---WCTGWCAG------
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--WCTGWCAG------
NNATTGACAGGTGCTT
 A C G T A C G T C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--WCTGWCAG------
GTATTGACAGGTNNTT
 A C G T A C G T C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---WCTGWCAG
NNNANTGA---
 A C G T A C G T A C G T C G T A G T A C C G A T A C T G C G A T A G T C C G T A C T A G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T