Information for 19-AGTGTTAGAA (Motif 37)

C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A A G T C A C G T
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.944
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets95.0 +/- 56.3bp
Average Position of motif in Background149.4 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTGTTAGAA-
AGGTGHCAGACA
 A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGTGTTAGAA----
TATCATTAGAACGCT
 A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTTAGAA--
AGGTGNCAGACAG
 A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGTGTTAGAA
ATTGTTA---
 C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGTGTTAGAA
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------AGTGTTAGAA
NNNNTGCCAGTGATTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGTGTTAGAA
AAGGTGTGAAA-
 A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTGTTAGAA
AGGTGTGAAM-
 A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTGTTAGAA----
CCGTATTATAAACAA
 A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTGTTAGAA
AGGTGTGA---
 A C G T C G T A A C T G A C G T A C T G C G A T A C G T C G T A A C T G C G T A G T C A
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T