Information for 18-ACTGGCTTCAAA (Motif 35)

T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A
Reverse Opposite:
A G C T G C A T A C G T A T C G T G C A C T G A C T A G A T G C G T A C C G T A A T C G A C G T
p-value:1e-12
log p-value:-2.872e+01
Information Content per bp:1.703
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets115.3 +/- 57.3bp
Average Position of motif in Background81.5 +/- 51.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACTGGCTTCAAA
--CGGTTTCAAA
 T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A
A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACTGGCTTCAAA
----GCTTCC--
 T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ACTGGCTTCAAA-
----NATTCAAAT
 T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACTGGCTTCAAA--
----ACATCAAAGG
 T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACTGGCTTCAAA
GGTCTGGCAT----
 A C G T A C G T T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACTGGCTTCAAA--
----ACWTCAAAGG
 T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACTGGCTTCAAA--
----ASATCAAAGG
 T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTGGCTTCAAA
AGAAATGACTTCCCT
 A C G T A C G T A C G T T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

GRHL2/MA1105.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACTGGCTTCAAA
NNAAACTGGTTTGNC-
 A C G T A C G T A C G T A C G T T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A
G T C A G T C A C T G A C T G A C T G A T A G C G C A T C A T G A T C G G C A T G A C T C G A T A C T G C A G T G A T C A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACTGGCTTCAAA----
--AAAGATCAAAGGAA
 T G C A T A G C G C A T C A T G T A C G G A T C G A C T A C G T T A G C G T C A C G T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A