Information for 13-GAGCTATT (Motif 32)

A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T
Reverse Opposite:
G T C A C T G A A C G T C G T A T C A G T A G C C G A T T G A C
p-value:1e-15
log p-value:-3.613e+01
Information Content per bp:1.806
Number of Target Sequences with motif1431.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif1140.6
Percentage of Background Sequences with motif4.03%
Average Position of motif in Targets97.4 +/- 57.9bp
Average Position of motif in Background98.3 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAGCTATT-----
---CTATTTTTGG
 A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GAGCTATT------
--KCTATTTTTRGH
 A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGCTATT------
--GCTATTTTTGGM
 A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGCTATT------
--GCTATTTTTAGC
 A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGCTATT--------
-TTCTATTTTTAGNNN
 A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAGCTATT-----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGCTATT--
-ACCGATTAG
 A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGCTATT-------
ACAAGCAATTAATGAAT
 A C G T A C G T A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGCTATT-------
ACAAGCAATTAATGAAT
 A C G T A C G T A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGCTATT------
--GCTATTTATAGC
 A C T G C G T A A T C G A G T C G C A T C G T A A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C