Information for 15-NGAGAATTTN (Motif 30)

T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A
Reverse Opposite:
C G A T T C G A G C T A C G T A G C A T C A G T T A G C A C G T A T G C A T G C
p-value:1e-18
log p-value:-4.307e+01
Information Content per bp:1.391
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets102.8 +/- 56.2bp
Average Position of motif in Background100.2 +/- 67.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:NGAGAATTTN-
-GGGAATTTCC
 T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----NGAGAATTTN
TTGACCGAGAATTCC
 A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

RELB/MA1117.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--NGAGAATTTN
NNGGGGAATNC-
 A C G T A C G T T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----NGAGAATTTN
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----NGAGAATTTN
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:NGAGAATTTN
NTGGAATGTN
 T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----NGAGAATTTN---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:NGAGAATTTN-
-GGGAATTTCC
 T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--NGAGAATTTN----
GGACTGAATTCATGCC
 A C G T A C G T T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:NGAGAATTTN
NTGGAATGTG
 T A C G T A C G T G C A A T C G G T C A C G T A C G A T C G A T A G C T G C T A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G