Information for 1-AGGGGATT (Motif 3)

T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T
Reverse Opposite:
C G T A G C T A G A C T G T A C A T G C A T G C T A G C A G C T
p-value:1e-79
log p-value:-1.823e+02
Information Content per bp:1.572
Number of Target Sequences with motif14666.0
Percentage of Target Sequences with motif51.32%
Number of Background Sequences with motif12953.3
Percentage of Background Sequences with motif45.74%
Average Position of motif in Targets99.9 +/- 55.8bp
Average Position of motif in Background100.6 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AGGGGATT--
NNGGGGAATNC
 A C G T T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATT------
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATT--
AAGAGGATTAG
 A C G T T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGGGATT
TGGGGA--
 T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGGGATT-----
AGGGGAATCCCCT
 T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATT-----
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGGGGATT-----
AGGGGAATCCCCT
 T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATT------
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATT-------
AGGGGGATTAGCTGCC
 A C G T T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATT-------
AGAGGGGATTAATTTAT
 A C G T A C G T T C G A A T C G T A C G T A C G C A T G C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T