Information for 9-CATGGCGTATTT (Motif 22)

T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T
Reverse Opposite:
C G T A T G C A C G T A C A G T G T C A G T A C C A T G G A T C G A T C G C T A C G A T A C T G
p-value:1e-26
log p-value:-6.131e+01
Information Content per bp:1.591
Number of Target Sequences with motif13763.0
Percentage of Target Sequences with motif48.16%
Number of Background Sequences with motif12739.8
Percentage of Background Sequences with motif44.98%
Average Position of motif in Targets100.4 +/- 54.9bp
Average Position of motif in Background100.3 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATGGCGTATTT
TAATGGCGGNC--
 A C G T T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATGGCGTATTT----
TNNTTTCGTATTNNANN
 A C G T T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATGGCGTATTT
TAAGGCGTCTTG
 T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CATGGCGTATTT
--TGACCTARTT
 T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CATGGCGTATTT
--TGACCTARTT
 T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORC/MA1151.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CATGGCGTATTT--
--TGACCTANTTAN
 T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T A C G T A C G T
A C G T A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORB/MA1150.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGGCGTATTT
-NTGACCTAATT
 T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T
A C G T C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATGGCGTATTT-
NNHYTGACCTAGWTT
 A C G T A C G T T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATGGCGTATTT-
-BTGACCTAVTTW
 T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T A C G T
A C G T A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATGGCGTATTT
-ATGACGTAAC-
 T G A C G C T A C G A T C T A G C T A G G T A C C A T G C A G T G T C A G C A T A C G T G C A T
A C G T T C G A A G C T A T C G G T C A A G T C C A T G G A C T T G C A C G T A G A T C A C G T