Information for 5-GAGTAATCTGGC (Motif 17)

T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C G C T A A T C G C G T A A C G T G A C T G T C A A G T C G A C T A G T C
p-value:1e-28
log p-value:-6.640e+01
Information Content per bp:1.825
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.6 +/- 51.9bp
Average Position of motif in Background72.3 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GAGTAATCTGGC--
----GGTCTGGCAT
 T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGTAATCTGGC---
CCNNACCATCTGGCCTN
 A C G T A C G T T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GAGTAATCTGGC---
------NTTGGCANN
 T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TWIST1/MA1123.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGTAATCTGGC--
-NNACATCTGGNNN
 T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C A C G T A C G T
A C G T C T G A T G C A T G C A T G A C C T G A A C G T T A G C G C A T C A T G A C T G G C T A C G T A G A C T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAGTAATCTGGC
--TTAATCCG--
 T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGTAATCTGGC---
-NNTAATCCNGNCNN
 T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGTAATCTGGC--
--GWAAYHTGABMC
 T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

RELB/MA1117.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGTAATCTGGC
NNGGGGAATNC---
 A C G T A C G T T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGTAATCTGGC----
-TGWAAYCTGABACCB
 T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

TEAD2/MA1121.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGTAATCTGGC
GNNTGGAATGTGN-
 A C G T A C G T T A C G C T G A A C T G C A G T C G T A G T C A C G A T A T G C C G A T C T A G A C T G A G T C
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T