Information for 10-ATGCTAATGG (Motif 16)

C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G
Reverse Opposite:
A G T C A G T C G T C A A C G T C A G T C G T A A T C G G T A C G T C A G A C T
p-value:1e-30
log p-value:-7.136e+01
Information Content per bp:1.785
Number of Target Sequences with motif261.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif114.3
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets97.0 +/- 54.8bp
Average Position of motif in Background90.5 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ATGCTAATGG-
WATGCAAATGAG
 A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-ATGCTAATGG-
TATGCWAATBAV
 A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-ATGCTAATGG
TATGCAAAT--
 A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ATGCTAATGG
TATGCAAAT--
 A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ATGCTAATGG
AATATGCAAATT-
 A C G T A C G T A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ATGCTAATGG
TTATGCAAATTA
 A C G T A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTAATGG
TTATGCAAAT--
 A C G T A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----ATGCTAATGG--
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----ATGCTAATGG--
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ATGCTAATGG
TTATGCAAATTA
 A C G T A C G T C T G A A C G T C A T G T A G C G C A T G T C A G T C A A C G T C T A G T C A G
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A