Information for 9-CGYTYGWC (Motif 13)

T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C
Reverse Opposite:
C A T G C G T A G T A C C T G A T G C A T C G A G A T C A T C G
p-value:1e-33
log p-value:-7.708e+01
Information Content per bp:1.557
Number of Target Sequences with motif4709.0
Percentage of Target Sequences with motif16.48%
Number of Background Sequences with motif3945.8
Percentage of Background Sequences with motif13.93%
Average Position of motif in Targets100.6 +/- 56.4bp
Average Position of motif in Background100.3 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGYTYGWC
ACCACTTGAA
 A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGYTYGWC
ANCGTTTANN
 A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGYTYGWC
CCACTTGAA
 A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGYTYGWC
NSCACTYVAV
 A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGYTYGWC--
-ATTTGAATT
 T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C A C G T A C G T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGYTYGWC--
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGYTYGWC
AASCACTCAA-
 A C G T A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGYTYGWC---
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

MYBL2/MA0777.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGYTYGWC----
AACCGTTAAACGGTC
 A C G T A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C A C G T A C G T A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGYTYGWC---
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T T A G C C T A G A G C T A C G T G A C T C A T G C G A T G T A C A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T