Information for 7-TAAGGCCG (Motif 10)

C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G
Reverse Opposite:
T G A C A T C G A T C G G T A C T G A C A C G T C G A T G C T A
p-value:1e-42
log p-value:-9.695e+01
Information Content per bp:1.450
Number of Target Sequences with motif7539.0
Percentage of Target Sequences with motif26.38%
Number of Background Sequences with motif6492.3
Percentage of Background Sequences with motif22.92%
Average Position of motif in Targets100.0 +/- 56.0bp
Average Position of motif in Background100.5 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAAGGCCG
TAATCCCN
 C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAAGGCCG
CTTAATCCC-
 A C G T A C G T C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAGGCCG---
TAATGGCGGNC
 C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G A C G T A C G T A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAAGGCCG--
--AGGCCTNG
 C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G A C G T A C G T
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAAGGCCG-------
-CAGGCCNNGGCCNN
 C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAAGGCCG
CTAATKGV-
 A C G T C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAAGGCCG
TTAATCCC-
 A C G T C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TAAGGCCG--
--AGGCCTAG
 C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G A C G T A C G T
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAAGGCCG
CAGATAAGGN--
 A C G T A C G T A C G T A C G T C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TAAGGCCG----
NNTAATCCNGNCNN
 A C G T A C G T C G A T G C T A T G C A A C T G C A T G T A G C T A G C A C T G A C G T A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A