track WGCNA
type bigBed 3
compositeTrack on
shortLabel WGCNA
longLabel WGCNA modules
visibility dense
group WGCNA

track Q_vs_WT
type bigBed 3
compositeTrack on
shortLabel Q_vs_WT
longLabel Q_vs_WT at different time points during development
visibility dense
group Q_vs_WT

track Msh3_project
type bigBed 3
compositeTrack on
shortLabel Msh3_project
longLabel tracks related to Msh3 knockout paper, showing  differential peaks (enrichment vs. depletion at different time points
visibility dense
group Msh3_project

track scMultiome
type bigBed 3
compositeTrack on
shortLabel scMultiome
longLabel tracks of differential peaks called using the single-cell data generation and analysis pipeline, multiome scRNA and scATAC
visibility dense
group scMultiome

track module_9
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_9.bb
shortLabel (WGCNA)M9
longLabel peaks corresponding to module_9 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_14
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_14.bb
shortLabel (WGCNA)M14
longLabel peaks corresponding to module_14 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_19
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_19.bb
shortLabel (WGCNA)M19
longLabel peaks corresponding to module_19 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_25
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_25.bb
shortLabel (WGCNA)M25
longLabel peaks corresponding to module_25 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_2
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_2.bb
shortLabel (WGCNA)M2
longLabel peaks corresponding to module_2 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_31
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_31.bb
shortLabel (WGCNA)M31
longLabel peaks corresponding to module_31 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_32
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_32.bb
shortLabel (WGCNA)M32
longLabel peaks corresponding to module_32 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_34
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_34.bb
shortLabel (WGCNA)M34
longLabel peaks corresponding to module_34 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_35
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_35.bb
shortLabel (WGCNA)M35
longLabel peaks corresponding to module_35 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_39
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_39.bb
shortLabel (WGCNA)M39
longLabel peaks corresponding to module_39 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_41
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_41.bb
shortLabel (WGCNA)M41
longLabel peaks corresponding to module_41 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_46
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_46.bb
shortLabel (WGCNA)M46
longLabel peaks corresponding to module_46 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_4
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_4.bb
shortLabel (WGCNA)M4
longLabel peaks corresponding to module_4 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track module_5
parent WGCNA on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/WGCNA/module_5.bb
shortLabel (WGCNA)M5
longLabel peaks corresponding to module_5 from WGCNA
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_12m_deplete_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_12m_deplete_FDR5.bb
shortLabel (QWT)QWT_12m_D
longLabel peaks corresponding to Q_vs_WT_12m_deplete_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_12m_enrich_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_12m_enrich_FDR5.bb
shortLabel (QWT)QWT_12m_E
longLabel peaks corresponding to Q_vs_WT_12m_enrich_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_2m_deplete_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_2m_deplete_FDR5.bb
shortLabel (QWT)QWT_2m_D
longLabel peaks corresponding to Q_vs_WT_2m_deplete_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_2m_enrich_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_2m_enrich_FDR5.bb
shortLabel (QWT)QWT_2m_E
longLabel peaks corresponding to Q_vs_WT_2m_enrich_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_3.5m_deplete_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_3.5m_deplete_FDR5.bb
shortLabel (QWT)QWT_3.5m_D
longLabel peaks corresponding to Q_vs_WT_3.5m_deplete_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_3.5m_enrich_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_3.5m_enrich_FDR5.bb
shortLabel (QWT)QWT_3.5m_E
longLabel peaks corresponding to Q_vs_WT_3.5m_enrich_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_6m_deplete_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_6m_deplete_FDR5.bb
shortLabel (QWT)QWT_6m_D
longLabel peaks corresponding to Q_vs_WT_6m_deplete_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q_vs_WT_6m_enrich_FDR5
parent Q_vs_WT on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Q_vs_WT/Q_vs_WT_6m_enrich_FDR5.bb
shortLabel (QWT)QWT_6m_E
longLabel peaks corresponding to Q_vs_WT_6m_enrich_FDR5 from Q_vs_WT
type bigBed 3
visibility dense
itemRgb On

track Q140Msh3_Q140_12m_deplete
parent Msh3_project on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Msh3_project/Q140Msh3_Q140_12m_deplete.bb
shortLabel (Msh3)QMsh3_Q_12D
longLabel peaks corresponding to Q140Msh3_Q140_12m_deplete from Msh3_project
type bigBed 3
visibility dense
itemRgb On

track Q140Msh3_Q140_12m_enrich
parent Msh3_project on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Msh3_project/Q140Msh3_Q140_12m_enrich.bb
shortLabel (Msh3)QMsh3_Q_12E
longLabel peaks corresponding to Q140Msh3_Q140_12m_enrich from Msh3_project
type bigBed 3
visibility dense
itemRgb On

track Q140_WT_12m_deplete
parent Msh3_project on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Msh3_project/Q140_WT_12m_deplete.bb
shortLabel (Msh3)Q_WT_12D
longLabel peaks corresponding to Q140_WT_12m_deplete from Msh3_project
type bigBed 3
visibility dense
itemRgb On

track Q140_WT_12m_enrich
parent Msh3_project on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/Msh3_project/Q140_WT_12m_enrich.bb
shortLabel (Msh3)Q_WT_12E
longLabel peaks corresponding to Q140_WT_12m_enrich from Msh3_project
type bigBed 3
visibility dense
itemRgb On

track D1_upQWT
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D1/up_Q_vs_WT.bb
shortLabel (sc)D1_upQWT
longLabel peaks corresponding to D1_upQWT from scMultiome
type bigBed 3
visibility dense
itemRgb On

track D1_downKOQQ
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D1/down_KOQ_vs_Q.bb
shortLabel (sc)D1_downKOQQ
longLabel peaks corresponding to D1_downKOQQ from scMultiome
type bigBed 3
visibility dense
itemRgb On

track D1_downQWT
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D1/down_Q_vs_WT.bb
shortLabel (sc)D1_downQWT
longLabel peaks corresponding to D1_downQWT from scMultiome
type bigBed 3
visibility dense
itemRgb On

track D1_upKOQQ
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D1/up_KOQ_vs_Q.bb
shortLabel (sc)D1_upKOQQ
longLabel peaks corresponding to D1_upKOQQ from scMultiome
type bigBed 3
visibility dense
itemRgb On

track D2_upQWT
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D2/up_Q_vs_WT.bb
shortLabel (sc)D2_upQWT
longLabel peaks corresponding to D2_upQWT from scMultiome
type bigBed 3
visibility dense
itemRgb On

track D2_downQWT
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D2/down_Q_vs_WT.bb
shortLabel (sc)D2_downQWT
longLabel peaks corresponding to D2_downQWT from scMultiome
type bigBed 3
visibility dense
itemRgb On

track D2_downKOQQ
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D2/down_KOQ_vs_Q.bb
shortLabel (sc)D2_downKOQQ
longLabel peaks corresponding to D2_downKOQQ from scMultiome
type bigBed 3
visibility dense
itemRgb On

track D2_upKOQQ
parent scMultiome on
bigDataUrl https://public.hoffman2.idre.ucla.edu/ernst/2K9RS//collab_william_yang/mm10/scMultiome/D2/up_KOQ_vs_Q.bb
shortLabel (sc)D2_upKOQQ
longLabel peaks corresponding to D2_upKOQQ from scMultiome
type bigBed 3
visibility dense
itemRgb On